Morich,
I agree with ignoring things which are not a problem. Just trying to determine if this is or isn't one of those things at this point.
When I cleaned the roof I noted here was a speck of something dark in the center of each of the discolorations - and when I rubbed them with a soapy washcloth they didn't come off. The most drastic I use related to scraping the fiberglass roof (which still is under warranty, so I'm not inclined to paint over it right now) is my fingernail - this WAS enough to "fleck off" the "dark specks", but the stains remained. So they are "in" not "on" the fiberglass.
They appear in two different spots ("clusters") on the roof, and were not present when new 1.5 years ago (wow, time flies). I suppose it could have been something dripping on it - no suspects come to mind at this point.
Mainly just hoping someone else has seen this and already has the answer.
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